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  • Datasets 62
  • Publications 18
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Amanda Achberger

Postdoctoral Research Associate
Texas A&M University
aachberger1216@gmail.com

Aggregation and Degradation of Dispersants and Oil by Microbial Exopolymers 2 (ADDOMEx-2)

RFP-VI
Gulf of Mexico Research Initiative (GoMRI)
Dataset Available

Adhesive force measurements between extracellular polymeric substances (EPS)

Authors: Ruei-Feng Shiu, Wei-Chun Chin
Published On: Jul 08 2020 20:54 UTC
File Format: csv
DOI: 10.7266/n7-bwdt-hs69
UDI: R6.x807.000:0001
File Size: 298 B
Dataset Available

Hydrophobic droplets trigger secretion of protein-rich microbial extracellular polymeric substances from phytoplankton

Authors: Ruei-Feng Shiu, Wei-Chun Chin
Published On: May 01 2020 21:22 UTC
File Format: csv
DOI: 10.7266/n7-3axn-rr89
UDI: R6.x807.000:0002
File Size: 6.79 KB
Dataset Available

Exopolymeric substances (EPS) mechanisms in aggregation & dispersion of oil: Fragmentation of Skeletonema grethae-775 snow – Aggregate characteristics

Authors: Ziervogel, Kai
Published On: Apr 30 2020 21:54 UTC
File Format: xlsx
DOI: 10.7266/n7-bkve-zg62
UDI: R6.x807.000:0003
File Size: 37.88 KB
Dataset Available

Exopolymeric substances (EPS) mechanisms in aggregation & dispersion of oil: Fragmentation of Skeletonema grethae-775 snow – Disaggregation dynamics

Authors: Ziervogel, Kai
Published On: May 01 2020 16:48 UTC
File Format: xlsx
DOI: 10.7266/n7-qzqh-bq48
UDI: R6.x807.000:0004
File Size: 38 KB
Dataset Available

Analytical measurements: Estimated Oil Equivalents (EOE) for MICROX, a mesocosm study to quantify microbial oxidation and degradation of oil

Authors: Terry Wade, Tony Knap
Published On: Aug 23 2019 19:19 UTC
File Format: xlsx
DOI: 10.7266/n7-hwws-b079
UDI: R6.x807.000:0005
File Size: 2.92 KB
Dataset Available

Analytical measurements: Time series of nutrients in MICROX, a mesocosm to quantify microbial oxidation and degradation of oil

Authors: Gopal Bera, Terry Wade, Anthony Knap
Published On: May 05 2020 16:46 UTC
File Format: xlsx
DOI: 10.7266/n7-bkwz-mj61
UDI: R6.x807.000:0007
File Size: 35.75 KB
Dataset

Microbial Community Composition and Structure, in MICROX, a mesocosm for studying the microbial oxidation and degradation of oil, June 2018, 16S

Authors:
Identified On: May 31 2018 15:15 UTC
DOI: 10.7266/n7-hx15-6868
UDI: R6.x807.000:0008
Dataset

Microbial Community Gene Expression, Mixed Isolate Bottle Experiment, LTOPOS, a Long Term Oil and Particle Oxidation mesocosm Study, qPCR measurements

Authors:
Identified On: May 31 2018 15:10 UTC
DOI: 10.7266/n7-xs7x-bt91
UDI: R6.x807.000:0009
Dataset Available

Mesocosom: Molecular level characterization of oil and aggregate oxidation products: MICROX, microbial oxidation and degradation of oil study (June 2018), FTICR-MS data

Authors: Waggoner, Derek, Hongmei Chen, and Patrick Hatcher
Published On: Jul 29 2020 16:43 UTC
DOI: 10.7266/n7-73gc-tq30
UDI: R6.x807.000:0010
File Size: 1.72 MB
Dataset Available

Molecular level characterization of oil and aggregate oxidation products: MICROX, a mesocosm for studying microbial oxidation and degradation of oil, two-dimensional gas chromatography-mass spectrometry (GCxGC-MS) data

Authors: Chen, Hongmei; Waggoner, Derek; Hatcher, Patrick
Published On: Jul 09 2020 16:14 UTC
File Format: pdf, xlsx, dat, peg
DOI: 10.7266/n7-gfqj-xx35
UDI: R6.x807.000:0011
File Size: 13.56 GB
Dataset Available

Physiological responses of marine phytoplankton exposed to oil and Corexit in culture experiments

Authors: Laura Bretherton, Andrew Irwin, Zoe Finkel, Antonietta Quigg
Published On: Aug 22 2019 15:40 UTC
File Format: csv
DOI: 10.7266/n7-jehv-5771
UDI: R6.x807.000:0014
File Size: 24.24 KB
Dataset Available

Change in molecular weight of aggregates in artificial seawater formed during irradiation and during irradiation with reactive oxygen species (ROS), size fractions of organic carbon

Authors: Sun, Luni and Peter Santschi
Published On: Aug 11 2020 17:01 UTC
DOI: 10.7266/n7-bxec-x617
UDI: R6.x807.000:0015
File Size: 9.08 KB
Dataset Available

Mesocosm: Rates of 14C hydrocarbon oxidation by microbial communities, MICROX, microbial oxidation and degradation of oil and oxidation rate measurements

Authors: Achberger, Amanda, Shawn Doyle, and Jason Sylvan
Published On: Jan 12 2021 17:04 UTC
File Format: xlsx
DOI: 10.7266/n7-h5zn-gb14
UDI: R6.x807.000:0016
File Size: 21.68 KB
Dataset Available

Mesocosm: Characterization of cell concentrations and microaggregate abundance, MICROX, to study the microbial oxidation and degradation of oil

Authors: Achberger, Amanda and Jason Sylvan
Published On: Jan 08 2021 20:07 UTC
File Format: xlsx
DOI: 10.7266/n7-p1yv-k581
UDI: R6.x807.000:0017
File Size: 15.32 KB
Dataset Available

Mesocosm: Fluorescent in situ hybridization of microaggregates, LTMOSE, a long-term marine oil snow experiment, abundances of Alcanivorax and Alteromonas

Authors: Achberger, Amanda and Jason Sylvan
Published On: Jan 07 2021 20:57 UTC
File Format: xlsx
DOI: 10.7266/n7-v9q1-5116
UDI: R6.x807.000:0018
File Size: 15.4 KB
Dataset Available

Mesocosm: microbial community structure, MICROX, microbial oxidation and degradation of oil, SSU rRNA sequences

Authors: Achberger, Amanda, Shawn Doyle, and Jason Sylvan
Published On: Dec 17 2020 20:32 UTC
File Format: txt
DOI: 10.7266/n7-fw1g-6935
UDI: R6.x807.000:0019
File Size: 17.98 KB
Dataset Available

Microaggregate microbial community metagenome, LTMOSE, a Long Term Marine Oil Snow Mesocosm Experiment, sequence data

Authors: Amanda Achberger, Jason Sylvan
Published On: Jul 09 2020 16:34 UTC
File Format: txt
DOI: 10.7266/n7-1kx8-0z36
UDI: R6.x807.000:0020
File Size: 4.66 KB
Dataset Available

Microcosm: Generation of EPS by phytoplankton and bacteria with and without polysaccharide inhibitor at various concentrations of WAF

Authors: Manoj Kamalanathan, Alexandra Yard, Antonietta Quigg
Published On: Sep 11 2018 21:52 UTC
File Format: csv
DOI: 10.7266/N7K64GNK
UDI: R6.x807.000:0022
File Size: 17.34 KB
Dataset Available

Microcosm: Flask experiment of phytoplankton-bacteria interaction in a natural community using control and oil treatments; non-radioactive experiment; extracellular polymeric substances (EPS) assays for protein, neutral sugar, uronic acid, organic carbon, and total nitrogen

Authors: Kamalanathan, Manoj, Kathy Schwehr, Christian Taylor, Charles Bergen, Nicole Patterson, Noah Claflin, Peter Sanstchi, and Antonietta Quigg
Published On: Dec 17 2020 23:13 UTC
File Format: csv
DOI: 10.7266/n7-n5p6-p566
UDI: R6.x807.000:0023
File Size: 3.57 KB
Dataset Available

Microcosm: Flask experiment of phytoplankton-bacteria interaction in a natural community using control and WAF treatments; radiolabeling experiment; activities of bacteria, phytoplankton, oil

Authors: Kamalanathan, Manoj, Kathy Schwehr, Christian Taylor, Charles Bergen, Nicole Patterson, Noah Claflin, Peter Sanstchi and Antonietta Quigg
Published On: Aug 07 2020 16:58 UTC
DOI: 10.7266/n7-321d-vj38
UDI: R6.x807.000:0024
File Size: 3.74 KB
Dataset Available

Microcosm: SEM micrographs of generation of exopolymeric substances (EPS) by phytoplankton and bacteria with and without polysaccharide inhibitor at various concentrations of WAF

Authors: Manoj Kamalanathan, Antonietta Quigg
Published On: Sep 04 2018 18:48 UTC
File Format: tiff, txt
DOI: 10.7266/N7FF3QZ9
UDI: R6.x807.000:0027
File Size: 3.55 MB
Dataset Available

Microcosm: CLSM micrographs of generation of exopolymeric substances (EPS) by phytoplankton and bacteria with and without polysaccharide inhibitor at various concentrations of WAF

Authors: Manoj Kamalanathan, Antonietta Quigg
Published On: Sep 04 2018 20:28 UTC
File Format: tif, txt
DOI: 10.7266/N79P307C
UDI: R6.x807.000:0028
File Size: 1.38 MB
Dataset Available

Microcosm: Flask experiment of phytoplankton-bacteria interaction in a natural community using control and water-accommodated fraction (WAF) treatments; non-radioactive experiment; Imaging FlowCytobot

Authors: Kamalanthan, Manoj and Antonietta Quigg
Published On: Dec 03 2020 23:00 UTC
File Format: csv; docx
DOI: 10.7266/n7-sj41-vw18
UDI: R6.x807.000:0029
File Size: 58.87 KB
Dataset Available

Microcosm: Flask experiment of phytoplankton-bacteria interaction in a natural community using control and water accommodated fraction (WAF) treatments; non-radioactive experiment, 16s sequencing

Authors: Kamalanathan, Manoj
Published On: Jul 20 2021 16:05 UTC
File Format: csv
DOI: 10.7266/n7-vtz2-9f39
UDI: R6.x807.000:0030
File Size: 2.18 KB
Dataset Available

Microaggregate Microbial Community Structure, Mesocosm Experiment, LTMOSE, a Long Term Marine Oil Snow Mesocosm Experiment, SSU rRNA sequences

Authors: Shawn Doyle, Amanda Achberger, Jason Sylvan
Published On: May 11 2020 20:59 UTC
File Format: txt
DOI: 10.7266/n7-z8x6-km14
UDI: R6.x807.000:0031
File Size: 175.72 KB
Dataset Available

Proteolysis rates and carbonyl contents of model proteins (fetuin, cytochrome c, bovine serum albumin, and lectin) during sunlight irradiation

Authors: Luni Sun, Peter Santschi
Published On: May 01 2020 20:39 UTC
File Format: xlsx
DOI: 10.7266/n7-tk2d-0x58
UDI: R6.x807.000:0032
File Size: 61.19 KB
Dataset Available

Hydroxyl radical formation rates during irradiation of hydrogen peroxide in artificial seawater

Authors: Luni Sun, Peter Santschi
Published On: Feb 28 2020 21:11 UTC
File Format: xlsx
DOI: 10.7266/n7-js8z-gm69
UDI: R6.x807.000:0033
File Size: 8.83 KB
Dataset Available

Response of toxigenic Pseudo-nitzschia sp. to oil and dispersant exposure over 6 days

Authors: Bretherton L, Hillhouse J, Bacosa H, Setta S, Genzer J, Kamalanathan M, Finkel Z, Quigg A
Published On: May 10 2019 21:50 UTC
File Format: csv
DOI: 10.7266/n7-qpqz-hn88
UDI: R6.x807.000:0035
File Size: 5.99 KB
Dataset Available

Dataset for: Partitioning of iron and plutonium in exopolymeric substances and intracellular biopolymers: a comparison study between the coccolithophore Emiliania huxleyi and the diatom Skeletonema costatum

Authors: Peng Lin, Chen Xu, Peter H. Santschi
Published On: Jun 19 2019 20:19 UTC
File Format: csv
DOI: 10.7266/n7-s6nb-4g30
UDI: R6.x807.000:0036
File Size: 1.19 KB
Dataset Available

Phyto-PAM-Fluorescence data: Effect of water-accommodated fraction (WAF) and water-soluble fraction (WSF) on phytoplankton’s photosynthetic performance and their relative abundance

Authors: Gopal Bera, Shawn Doyle, Uta Passow, Manoj Kamalanathan, Terry L. Wade, Jason B. Sylvan, Jose L. Sericano, Gerardo Gold, Antonietta Quigg, Anthony H. Knap
Published On: Sep 05 2019 17:19 UTC
File Format: csv
DOI: 10.7266/n7-vr07-xh30
UDI: R6.x807.000:0037
File Size: 5.49 KB
Dataset Available

Molecular level characterization of oil and aggregate oxidation products: LTOPOS, a Long Term Oil and Particle Oxidation Study, two-dimensional gas chromatography-mass spectrometry (GCxGC-MS) data

Authors: Chen, Hongmei and Patrick Hatcher
Published On: Jul 27 2020 21:05 UTC
File Format: pdf, xlsx, dat, peg
DOI: 10.7266/6PQ43JR2
UDI: R6.x807.000:0038
File Size: 5.81 GB
Dataset Available

Molecular level characterization of oil and aggregate oxidation products: LTOPOS, a Long Term Oil and Particle Oxidation Study, Fourier transform ion cyclotron mass spectrometry (FTICR-MS) data

Authors: Chen, Hongmei and Patrick Hatcher
Published On: Aug 06 2020 15:12 UTC
File Format: xlsx, txt
DOI: 10.7266/CHPW46GN
UDI: R6.x807.000:0039
File Size: 1.74 MB
Dataset Available

Eukaryotic phytoplankton community composition in the COAST (Gulf of Mexico, COASTal water mesocosms amended with coastal microbial concentrate) mesocosm as identified by 18S sequence from RNA-seq whole transcriptome sequencing for four treatments (control, WAF, CEWAF, dilute CEWAF)

Authors: Zoe Finkel, Andrew Irwin, Yue Liang, Deepak Nanjappa
Published On: Jan 17 2020 22:09 UTC
File Format: csv
DOI: 10.7266/032DBZJY
UDI: R6.x807.000:0040
File Size: 333.35 KB
Dataset Available

Analytical measurements of nutrients in a mesocosm, a Long Term Oil and Particle Oxidation Study (LTOPOS)

Authors: Bera Gopal, Wade Terry
Published On: Jul 08 2020 21:41 UTC
File Format: xlsx
DOI: 10.7266/GNK5X0RS
UDI: R6.x807.000:0041
File Size: 22.04 KB
Dataset Available

Estimated Oil Equivalents (EOE) for LTOPOS, a mesocosm to quantify microbial oxidation and degradation of oil

Authors: Terry Wade, Tony Knap
Published On: Aug 23 2019 16:33 UTC
File Format: csv
DOI: 10.7266/3RTQ512B
UDI: R6.x807.000:0043
File Size: 918 B
Dataset Available

Rates of 14C hydrocarbon oxidation by microbial communities, LTMOSE, a Long Term Marine Oil Snow Experiment, oxidation rate measurements, a mesocosm experiment

Authors: Achberger, Amanda, Shawn Doyle, and Jason Sylvan
Published On: Aug 11 2020 15:04 UTC
DOI: 10.7266/3ZVPZ2F8
UDI: R6.x807.000:0044
File Size: 18.59 KB
Dataset Available

Characterization of cell concentrations and microaggregate abundance and size, LTMOSE, a Long Term Marine Oil Snow Mesocosm Experiment, abundance counts

Authors: Amanda Achberger, Charlie Holmes, Jason Sylvan
Published On: Jul 09 2020 15:44 UTC
File Format: xlsx
DOI: 10.7266/N71GNKT1
UDI: R6.x807.000:0045
File Size: 94.09 KB
Dataset Available

Metatranscriptomes: Gulf of Mexico Open Ocean (GOMOO) and Gulf of Mexico Coastal Waters (GOMCOAST)

Authors: Shawn Doyle, Genmei Lin, Jason Sylvan
Published On: Sep 05 2019 20:25 UTC
File Format: txt, docx
DOI: 10.7266/9EDJRA3Q
UDI: R6.x807.000:0046
File Size: 42.29 KB
Dataset Available

Concentrations of polycyclic aromatic hydrocarbons (PAHs) in surface water of Galveston Bay collected aboard R/V Trident cruises following Hurricane Harvey from 2017-09-04 to 2017-09-28

Authors: Hernando Bacosa, Antonietta Quigg
Published On: Sep 13 2019 20:17 UTC
File Format: xlsx
DOI: 10.7266/PGC99C7D
UDI: R6.x807.000:0047
File Size: 47.87 KB
Dataset Available

ADDOMEx Tier 3 Experiments: Mesocosm #3 Gulf of Mexico open ocean waters (GOMOO) and Mesocosm #4 Gulf of Mexico coastal waters (GOMCOAST) 10 um filter size

Authors: Jason Sylvan, Shawn Doyle, Samantha Setta, Genmei Lin
Published On: Mar 17 2020 19:46 UTC
File Format: txt
DOI: 10.7266/AM04VH3H
UDI: R6.x807.000:0048
File Size: 111.13 KB
Dataset Available

Mesocosm experiment: Exoenzyme activity, organic carbon and nitrogen, exopolymeric substances, dissolved inorganic nitrogen and phosphate, and estimated oil equivalent data measured using control and WAF treatments

Authors: Manoj Kamalanathanan, Shawn M. Doyle, Chen Xu, Gerardo Gold-Bouchot, Amanda Achberger, Hernando Bacosa, Laura Bretherton, Maya E. Morales-McDevitt, Terry L. Wade, Kathy Schwehr, Peter Santschi, Jason B. Sylvan, Antonietta Quigg
Published On: Dec 19 2019 21:37 UTC
File Format: csv
DOI: 10.7266/2J7H8GGS
UDI: R6.x807.000:0049
File Size: 9.44 KB
Dataset Available

ADDOMEx Tier 3 Experiments: Mesocosm #3 Gulf of Mexico open ocean waters (GOMOO) and Mesocosm #4 Gulf of Mexico coastal waters (GOMCOAST) 0.2 um filter size

Authors: Jason Sylvan, Shawn Doyle, Samantha Setta, Genmei Lin
Published On: Dec 10 2019 21:35 UTC
File Format: txt
DOI: 10.7266/8B8S9NTW
UDI: R6.x807.000:0050
File Size: 126.82 KB
Dataset Available

Concentrations of polycyclic aromatic hydrocarbons (PAHs) in marine snow aggregates

Authors: Hernando Bacosa
Published On: Oct 23 2019 20:00 UTC
File Format: xlsx
DOI: 10.7266/5P8B7NWV
UDI: R6.x807.000:0051
File Size: 11.69 KB
Dataset Available

How does oil exposure affect centric diatom Thalassiosira pseudonana?

Authors: Manoj Kamalanathan, Savannah Mapes, Jessica Hillhouse, Noah Claflin, Douglas Campbell, Antonietta Quigg
Published On: Dec 10 2019 20:26 UTC
File Format: csv
DOI: 10.7266/BSYXMGD0
UDI: R6.x807.000:0052
File Size: 94.52 KB
Dataset Available

Identification of biochemical pathways contributing to oil tolerant ability of Dunaliella tertiolecta

Authors: Manoj Kamalanathan, Savannah Mapes, Patricia Faulkner, Jessica Hillhouse, David Hala, John Beardall, John Raven, Antonietta Quigg
Published On: Dec 10 2019 20:46 UTC
File Format: csv
DOI: 10.7266/X3FBFZZH
UDI: R6.x807.000:0053
File Size: 20.12 KB
Dataset Available

Response of Karenia brevis growth and brevetoxin production to oil and dispersant exposure

Authors: Manoj Kamalanathan, Savannah Mapes, Jessica Hillhouse, Noah Claflin, Antonietta Quigg
Published On: Dec 10 2019 22:26 UTC
File Format: csv
DOI: 10.7266/9S7P1KD6
UDI: R6.x807.000:0054
File Size: 4.87 KB
Dataset Available

Impacts of photo-oxidized dispersed oil on Phaeodactylum tricornutum

Authors: Manoj Kamalanathan, Julissa Freund, Jessica Hillhouse, Noah Claflin, Antonietta Quigg
Published On: Dec 11 2019 16:30 UTC
File Format: csv
DOI: 10.7266/QN937KJ1
UDI: R6.x807.000:0055
File Size: 8 KB
Dataset Available

The effect of oil and weathered oil along with nitrogen and carbon supplementation on natural phytoplankton community composition, growth and physiology

Authors: Manoj Kamalanathan, Jessica Hillhouse, Antonietta Quigg
Published On: Dec 11 2019 17:05 UTC
File Format: csv
DOI: 10.7266/CXTPJ6JR
UDI: R6.x807.000:0056
File Size: 54.4 KB
Dataset Available

Potential impacts of ocean acidification on diatom aggregation when exposed to crude oil and chemical dispersants

Authors: Jennifer Genzer, Jessica Hillhouse, Manoj Kamalanathan, Laura Bretherton, Antonietta Quigg
Published On: Jun 24 2020 21:03 UTC
File Format: xlsx
DOI: 10.7266/VF86SWMX
UDI: R6.x807.000:0058
File Size: 30.07 KB
Dataset Available

Effects of nutrient availability on the diatom Phaeodactylum tricornutum in the presence of oil

Authors: Hillhouse, Jessica, Manoj Kamalanathan, Talia Rodkey, Andrew Mondragon, Noah Claflin, and Antonietta Quigg
Published On: Jan 11 2021 20:58 UTC
File Format: 7z, xlsx, rpt, RES, tif
DOI: 10.7266/1TBZJDET
UDI: R6.x807.000:0059
File Size: 5.26 MB
Dataset Available

Molecular level characterization of oil and aggregate oxidation products: LTOPOS, a Long Term Oil and Particle Oxidation Study, Nuclear magnetic resonance (NMR) data

Authors: Chen, Hongmei and Patrick Hatcher
Published On: Aug 05 2020 20:48 UTC
File Format: xlsx
DOI: 10.7266/5ZC7V4G9
UDI: R6.x807.000:0060
File Size: 155.24 MB
Dataset Available

Alkanes Data in Seawater and in Diluted Chemically Enhanced Water-Accommodated Fraction (WAF) of Oil for LTOPOS, a Long-Term Oil and Particle Oxidation Study (Mesocosom 7)

Authors: Liu, Yina and Terry Wade
Published On: Aug 07 2020 19:04 UTC
DOI: 10.7266/3EGKX98Y
UDI: R6.x807.000:0061
File Size: 26.41 KB
Dataset Available

Targeted metabolite data in seawater and in Diluted Chemically Enhanced Water-Accommodated Fraction (DCEWAF) of Oil for LTOPOS a Long Term Oil and Particle Oxidation Study (Mesocosom 7)

Authors: Liu, Yina and Terry Wade
Published On: Aug 10 2020 19:17 UTC
DOI: 10.7266/M53EPF39
UDI: R6.x807.000:0062
File Size: 18.74 KB
Dataset Available

Mesocosm 7: Polycyclic Aromatic Hydrocarbon (PAH) data in seawater and in Diluted Chemically Enhanced Water-Accommodated Fraction (DCEWAF) of oil for LTOPOS, a Long Term Oil and Particle Oxidation Study

Authors: Liu, Yina and Terry Wade
Published On: Aug 11 2020 16:05 UTC
DOI: 10.7266/ER1EGZ8E
UDI: R6.x807.000:0063
File Size: 30.19 KB
Dataset Available

Exopolymeric substances (EPS) composition in colloidal fraction, suspended particulate matter and sinking marine snow or marine oil snow during a long term coastal phytoplankton seeded mesocom experiment

Authors: Chen Xu, Peter Santschi
Published On: Apr 13 2020 20:08 UTC
File Format: xlsx
DOI: 10.7266/VV5Y6T6G
UDI: R6.x807.000:0064
File Size: 15.18 KB
Dataset Available

Colored dissolved organic matter (CDOM) and chlorophyll a and b data in seawater, water-accommodated fraction (WAF) and diluted chemically enhanced WAF (DCEWAF) of oil for the mesocosm LTMOSE, a Long Term Marine Oil Snow mesocosm Experiment

Authors: Gerardo Gold-Bouchot, Terry Wade
Published On: Mar 30 2020 16:31 UTC
File Format: csv
DOI: 10.7266/9A6N3FWC
UDI: R6.x807.000:0065
File Size: 35.78 MB
Dataset Available

Dataset for: Microbial, Physical, and Chemical Changes in Galveston Bay Following an Extreme Flooding Event, Hurricane Harvey

Authors: Jamie L. Steichen, Jessica M. Labonté, Rachel Windham, David Hala, Karl Kaiser, Samantha Setta, Patricia Faulkner, Herdando Bacosa, Ge Yan, Manoj Kamalanathan, and Antonietta Quigg
Published On: Nov 18 2020 22:23 UTC
File Format: png, xlsx
DOI: 10.7266/PCW7PK3F
UDI: R6.x807.000:0067
File Size: 2.16 MB
Dataset Available

Dataset for: A ribosomal sequence-based oil sensitivity index for phytoplankton groups

Authors: Andrew Irwin
Published On: Jun 26 2020 16:40 UTC
File Format: xlsx
DOI: 10.7266/DDESWY3N
UDI: R6.x807.000:0068
File Size: 13.18 KB
Dataset Available

Effect of oil exposure on reactive oxygen species (ROS) levels in diatom Thalassiosira pseudonana and a comparison of exposure of oil to hydrogen peroxide on the photosynthetic physiology within 24 hours

Authors: Kamalanathan, Manoj and Antonietta Quigg
Published On: Jan 04 2021 22:10 UTC
File Format: csv
DOI: 10.7266/ECPYPXYZ
UDI: R6.x807.000:0069
File Size: 11.7 KB
Dataset Available

Reactive oxygen diatom species Phaeodactylum tricornutum and Thalassiosira pseudonana in response to oil exposure

Authors: Kamalanathan, Manoj
Published On: Dec 17 2020 20:53 UTC
File Format: csv
DOI: 10.7266/ZBJY1NQM
UDI: R6.x807.000:0070
File Size: 634 B
Dataset Available

Polycyclic Aromatic Hydrocarbons (PAHs) Cycling and Fates in Galveston Bay, Texas, USA

Authors: Santschi, Peter H. and Antonietta Quigg
Published On: Jan 07 2021 19:17 UTC
DOI: 10.7266/4N1X8ZAC
UDI: R6.x807.000:0071
File Size: 45.57 KB
Dataset Available

Mesocosm: Eukaryotic community response to oil and oil-dispersant mixtures in the COAST (Gulf of Mexico, COASTal water mesocosms amended with coastal microbial concentrate)

Authors: Irwin, Andrew
Published On: Jan 04 2021 20:33 UTC
File Format: xlsx, gz
DOI: 10.7266/2JWNDY5F
UDI: R6.x807.000:0072
File Size: 203.19 MB

Achberger, A. M., Doyle, S. M., Mills, M. I., Holmes, C. P., Quigg, A., & Sylvan, J. B. (2021). Bacteria-Oil Microaggregates Are an Important Mechanism for Hydrocarbon Degradation in the Marine Water Column. MSystems, 6(5). https://doi.org/10.1128/msystems.01105-21

Bacosa, H. P., Kamalanathan, M., Cullen, J., Shi, D., Xu, C., Schwehr, K. A., … Quigg, A. (2020). Marine Snow Aggregates are Enriched in Polycyclic Aromatic Hydrocarbons (PAHs) in Oil Contaminated Waters: Insights from a Mesocosm Study. Journal of Marine Science and Engineering, 8(10), 781. doi:10.3390/jmse8100781

Bretherton, L., Hillhouse, J., Bacosa, H., Setta, S., Genzer, J., Kamalanathan, M., … Quigg, A. (2019). Growth dynamics and domoic acid production of Pseudo-nitzschia sp. in response to oil and dispersant exposure. Harmful Algae, 86, 55–63. doi:10.1016/j.hal.2019.05.008

Bretherton, L., Hillhouse, J., Kamalanathan, M., Finkel, Z. V., Irwin, A. J., & Quigg, A. (2020). Trait-dependent variability of the response of marine phytoplankton to oil and dispersant exposure. Marine Pollution Bulletin, 153, 110906. doi:10.1016/j.marpolbul.2020.110906

Chen, C.-S., Shiu, R.-F., Hsieh, Y.-Y., Xu, C., Vazquez, C. I., Cui, Y., … Chin, W.-C. (2021). Stickiness of extracellular polymeric substances on different surfaces via magnetic tweezers. Science of The Total Environment, 757, 143766. doi:10.1016/j.scitotenv.2020.143766

Doyle, S. M., Lin, G., Morales-McDevitt, M., Wade, T. L., Quigg, A., & Sylvan, J. B. (2020). Niche Partitioning between Coastal and Offshore Shelf Waters Results in Differential Expression of Alkane and Polycyclic Aromatic Hydrocarbon Catabolic Pathways. mSystems, 5(4). doi:10.1128/msystems.00668-20

Finkel, Z. V., Liang, Y., Nanjappa, D., Bretherton, L., Brown, C. M., Quigg, A., & Irwin, A. J. (2020). A ribosomal sequence-based oil sensitivity index for phytoplankton groups. Marine Pollution Bulletin, 151, 110798. doi:10.1016/j.marpolbul.2019.110798

Genzer, J. L., Kamalanathan, M., Bretherton, L., Hillhouse, J., Xu, C., Santschi, P. H., & Quigg, A. (2020). Diatom aggregation when exposed to crude oil and chemical dispersant: Potential impacts of ocean acidification. PLOS ONE, 15(7), e0235473. doi:10.1371/journal.pone.0235473

Kamalanathan, M., Chiu, M.-H., Bacosa, H., Schwehr, K., Tsai, S.-M., Doyle, S., … Quigg, A. (2019). Role of Polysaccharides in Diatom Thalassiosira pseudonana and its Associated Bacteria in Hydrocarbon Presence. Plant Physiology, 180(4), 1898–1911. doi:10.1104/pp.19.00301

Kamalanathan, M., Doyle, S. M., Xu, C., Achberger, A. M., Wade, T. L., Schwehr, K., … Quigg, A. (2020). Exoenzymes as a Signature of Microbial Response to Marine Environmental Conditions. mSystems, 5(2). doi:10.1128/msystems.00290-20

Kamalanathan, M., Mapes, S., Hillhouse, J., Claflin, N., Leleux, J., Hala, D., & Quigg, A. (2021). Molecular mechanism of oil induced growth inhibition in diatoms using Thalassiosira pseudonana as the model species. Scientific Reports, 11(1). https://doi.org/10.1038/s41598-021-98744-9

Kamalanathan, M., Mapes, S., Prouse, A., Faulkner, P., Klobusnik, N. H., Hillhouse, J., Hala, D., & Quigg, A. (2022). Core metabolism plasticity in phytoplankton: Response of Dunaliella tertiolecta to oil exposure. Journal of Phycology, 58(6), 804–814. Portico. https://doi.org/10.1111/jpy.13286

Kamalanathan, M., Schwehr, K. A., Labonté, J. M., Taylor, C., Bergen, C., Patterson, N., … Quigg, A. (2021). The Interplay of Phototrophic and Heterotrophic Microbes Under Oil Exposure: A Microcosm Study. Frontiers in Microbiology, 12. doi:10.3389/fmicb.2021.675328

Lin, P., Xu, C., Xing, W., Sun, L., Schwehr, K. A., Quigg, A., & Santschi, P. H. (2019). Partitioning of iron and plutonium to exopolymeric substances and intracellular biopolymers: A comparison study between the coccolithophore Emiliania huxleyi and the diatom Skeletonema costatum. Marine Chemistry, 103735. doi:10.1016/j.marchem.2019.103735

Quigg, A., Parsons, M., Bargu, S., Ozhan, K., Daly, K. L., Chakraborty, S., … Buskey, E. J. (2021). Marine phytoplankton responses to oil and dispersant exposures: Knowledge gained since the Deepwater Horizon oil spill. Marine Pollution Bulletin, 164, 112074. doi:10.1016/j.marpolbul.2021.112074

Shiu, R.-F., Vazquez, C. I., Chiang, C.-Y., Chiu, M.-H., Chen, C.-S., Ni, C.-W., … Chin, W.-C. (2020). Nano- and microplastics trigger secretion of protein-rich extracellular polymeric substances from phytoplankton. Science of The Total Environment, 748, 141469. doi:10.1016/j.scitotenv.2020.141469

Steichen, J. L., Labonté, J. M., Windham, R., Hala, D., Kaiser, K., Setta, S., … Quigg, A. (2020). Microbial, Physical, and Chemical Changes in Galveston Bay Following an Extreme Flooding Event, Hurricane Harvey. Frontiers in Marine Science, 7. doi:10.3389/fmars.2020.00186

Sun, L., Xu, C., Lin, P., Quigg, A., Chin, W.-C., & Santschi, P. H. (2021). Photo-oxidation of proteins facilitates the preservation of high molecular weight dissolved organic nitrogen in the ocean. Marine Chemistry, 229, 103907. doi:10.1016/j.marchem.2020.103907