GRIIDC | R1.x135.120:0001

Dataset Available

Gulf of Mexico Deepwater Ciliate communities, August 16-28, 2013.

Authors: Wade Jeffrey

Published On: Jul 16 2014 00:48 UTC

DOI: https://doi.org/10.7266/N7RB72KS

UDI: R1.x135.120:0001

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Individual Files

No. of Downloads: 9

No. of Files: 1

File Size: 1.69 MB

File Format(s):
xlsx

Project Information

Funded By:
Gulf of Mexico Research Initiative

Funding Cycle:
RFP-I

Research Group:
Center for Integrated Modeling and Analysis of Gulf Ecosystems (C-IMAGE)

Point of Contact

Wade H. Jeffrey
University of West Florida / Center for Environmental Diagnostics and Bioremediation
wjeffrey@uwf.edu

Data Collection Period

2013-08-16

2013-08-28

Theme keywords

ciliate community structure

ISO 19115-2 Metadata

View Metadata

Abstract:

These data are identified ciliates from deepwater and sediment-water interface samples from the northern Gulf of Mexico based on sequences of cloned 17S rRNA genes.

Suggested Citation:

Wade Jeffrey. 2014. Gulf of Mexico Deepwater Ciliate communities, August 16-28, 2013.. Distributed by: GRIIDC, Harte Research Institute, Texas A&M University–Corpus Christi. doi:10.7266/N7RB72KS

Purpose:

The goal was to examine the diversity and stability of ciliate community structure in deepwater and sediment water interface (immediately above sediments) in deep Gulf of Mexico samples that may have been impacted by the Deepwater Horizon Oil Spill.

Data Parameters and Units:

Computative identification of individual clones. Samples are identified by the station location from which they were collected and by the depth (either water column depth in meters (m) or Water over Core (WOC)). Ciliate_sequencing_summary.xlsx-- excel spreadsheet tab named Header: Station (1.DSH07, 2.DWH, 3.SE02, 4.SL1040, 5.SL5100, 6.SL7150, 7.SL9150, 8.SL11150, 9.SL14100, 10.SL16150), Date (MM/DD/YYYY), Latitude (decimal degrees), Longitude (decimal degrees), site map (Note: the map contains an additional 11.SW01 site without data in the excel file), sample photo of the WOC "Water over Core" (or water column at specified meter depths) collected on Sterivex filters. DATA PARAMETERS Clone ID, Organism, Accession #, Max Identity % were collected for the excel spreadsheet tabs 1.DSH07, 2.a.DWH1570m, 2.b.DWH_WOC, 3.SE02_WOC, 4.a.SL1040_55m, 4.b.SL1040_surface, 4.c.SL1040_WOC, 5.a.SL5100_167m, 5.b.SL5100_WOC, 6.a.SL7150_340m, 6.b.SL7150_WOC, 7.SL9150_WOC, 8.SL11150_WOC, 9.a.SL14100_204m, 9.b.SL14100_WOC, 10.SL16150_WOC.

Instruments:

Samples collected during a research cruise aboard the RV WEATHERBIRD II during August 2013 in the northern Gulf of Mexico.

Error Analysis:

Identify percentage match to existing data bases

Provenance and Historical References:

Dopheide A, G. Lear, R. Stott and G Lewis. 2008. Molecular Characterization of Ciliate Diversity in Stream Biofilms. Appl. Environ. Microbiol. 2008, 74(6):1740. DOI: 10.1128/AEM.01438-07.